Refactor structure, implement layers, add Erode/Fill/layer panel

- Restructure folder hierarchy: max 4 .rs per dir using subfolders
  (ops/operations -> brush/ + shaping/, model/ -> world/, io/* -> subtypes, etc.)
- Fix golden_test.rs comment, extract BrushApply helper, add World::with_heightmap
- Implement 6 layer data generators (Caves, River, Frost, Trees, Biome, Resources)
  with noise-based (OpenSimplex) and terrain-derived algorithms
- Fix clippy warnings, dead code cleanup, import path fixes
- GUI: add Erode&Fill tool modes with radio buttons/sliders/apply_tool
- GUI: add Layers panel with 6 checkboxes + CPU viewport overlay rendering

cli/src/cmds/io/mod.rs

@@ -0,0 +1,3 @@
+pub mod export;
+pub mod import;
+pub mod render;

cli/src/cmds/mod.rs

@@ -1,5 +1,7 @@
-pub mod export;
-pub mod import;
+mod io;
+pub use io::export;
+pub use io::import;
+pub use io::render;
+
 pub mod info;
 pub mod new;
-pub mod render;